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 SEQstandards and MINSEQE: Minimum Information about a high-throughput SeQuencing Expt |
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Nov 13, 2012 - 11:20 AM - by Joann
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Introduction to the forum: a new standards page at the SEQWiki.
Our new Wiki page hopes to be a quick and easy source of standards guidance from FGED-MINSEQE as well as various other global standards initiatives relevant to forum members with the idea of helping to put things out there sooner than later. The FGED board has chosen SEQanswers as the most appropriate location in the entire webverse to host feedback opportunities on their consensus format for ultra high through put sequencing experiments. The forum is a great place to conduct discussions, and already has been active in exploring terminology issues and more. This thread would be a place to start collecting these discussions, plus feedback, inquiries and input from our forum members and also to refer students, especially, to the new Wiki page material on formal standards guidelines for sequencing and publishing sequence data.
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8 Replies | 4,252 Views
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Oxford Nanopore @ ASHG |
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Nov 07, 2012 - 9:29 AM - by GW_OK
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New thread started for ONT discussion as the old one was getting long. Also, GridION spotted in the wild?
Quote:
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Originally Posted by twitter
Roger Pettett @zerojinx
Guess that ware! #ashg2012 pic.twitter.com/Umfu2chX
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So it's not a hollow box...
A call out to all ASHG attendees to please document ONT's announcements and hardware here for the community not attending.
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44 Replies | 17,627 Views
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New Tech at AGBT |
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Feb 17, 2012 - 1:28 AM - by aeonsim
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I thought it might be useful to collate the bits and pieces about new platforms discussed during AGBT (Those that don't already have a thread), for those of us unlucky enough not to attended. Grabbing the info from various tweets listed at: http://pathogenomics.bham.ac.uk/blog...-day-2-tweets/
If any one at AGBT could supply additional information from the talks, that'd be appreciated or any links to blogs covering the tech.
GnuBIO
Read Length: 1000bp
Accuray: Phred 70+
Holopolymers: Phred 70+ to 9bp
Sample Prep: < 1min
System is rackable, ~30lbs, Dry Instrument fludics in cartridge. Beta Mid-2012, commercial end of 2012? Real time Variant calling, each base queried 6 times.
Source:
http://t.co/JPKbR7L2
... [Read More]
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47 Replies | 11,687 Views
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