Hi folks!
We did De novo RNASeq for invertebrate transcriptome.
We had 3 biological conditions.
I found that a list of 150 contigs are differentially expressed between all the conditions.(I used DESeq of R)
i blastx those contigs against uniprot to get some homologous information.
Is there any recommended tool for downstream analysis?
Thanks,
Pap
We did De novo RNASeq for invertebrate transcriptome.
We had 3 biological conditions.
I found that a list of 150 contigs are differentially expressed between all the conditions.(I used DESeq of R)
i blastx those contigs against uniprot to get some homologous information.
Is there any recommended tool for downstream analysis?
Thanks,
Pap
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