View Full Version : CASIM: ChIP-Seq of Repetitive Regions

04-18-2013, 12:27 PM
I am particularly interested in analysing repetitive sequences in the genome - ChIP-Seq of histone modifications that are associated with simple repeats or interspersed retroelements for example. What are reliable methods for analysing sequence tags that cannot be uniquely mapped to the genome and how do I separate true differences from artefacts.