#segemehl Tue Jul 13 16:07:48 2010 #query: genome.fa #subject: 12228.idx #minsize=12, diff_seed=1, score_ext=2, penalty_mis:4, Xoff=8, acc=85, maxEvalue: 5.00000, hitstrategy: 1 #"colheader" #"descr" "semi global alignment edist" "seed score" "seed Evalue" "seed qstart" "seed qend" "semi global alignment matches" "semi global alignment mismatches" "semi global alignment insertions" "semi global alignment deletions" "strand" "start of semi global alignment in subject sequence" "end of semi global alignment in subject sequence" "sequenceidx" >HWI-EAS283_0008:8:49:1860:5407#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2117555 2117590 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:11:7174:13990#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1692274 1692309 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:60:12686:10982#AGCTAT/1 1 34 0.0000 1 36 35 1 0 0 + 1247804 1247839 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M11;S1;M24; >HWI-EAS283_0008:8:49:6750:18581#AGCTAT/1 3 30 0.0000 1 36 33 3 0 0 + 2311783 2311818 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M18;S1;M11;S1;M2;S1;M2; >HWI-EAS283_0008:8:120:17566:20975#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 210022 210057 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:65:16923:4287#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1809493 1809528 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:65:16923:4287#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2333731 2333766 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:65:16923:4287#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1595706 1595741 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:65:16923:4287#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1720175 1720210 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:65:16923:4287#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2378462 2378497 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:44:3314:7231#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1859464 1859499 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:23:12200:16705#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 863282 863317 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:13:13707:12818#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1341060 1341095 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:11:2284:2987#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 26184 26219 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:54:15599:16414#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1785147 1785182 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:116:16098:17253#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1774840 1774875 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:108:16036:4054#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 309968 310003 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:33:3600:8540#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 839203 839238 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:115:4517:3901#AGCTAT/1 2 32 0.0000 1 36 34 2 0 0 + 2310417 2310452 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M22;S1;M8;S1;M4; >HWI-EAS283_0008:8:99:17778:17560#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 146858 146893 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:57:17394:7948#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 293877 293912 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:100:9635:12370#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2439837 2439872 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:77:5740:9158#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 1340290 1340325 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:45:15740:11112#AGCTAT/1 1 34 0.0000 1 36 35 1 0 0 - 1778434 1778469 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M27;S1;M8; >HWI-EAS283_0008:8:88:10650:9209#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2140317 2140352 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:24:18400:10437#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 487799 487834 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:107:11847:9945#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 863294 863329 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:63:4118:7957#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1068442 1068477 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:51:14169:8511#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1236955 1236990 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:70:14271:19383#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2472474 2472509 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:56:15688:2658#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 974624 974659 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:4:1664:7094#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2252564 2252599 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:86:6011:6737#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1896175 1896210 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:11:9741:16491#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 2412400 2412435 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:8:2709:5354#AGCTAT/1 1 35 0.0000 1 36 36 0 0 1 + 1625935 1625971 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M34;I1;M2; >HWI-EAS283_0008:8:108:5980:9832#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 + 927965 928000 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:104:17255:12512#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2454303 2454338 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:95:4976:16890#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 1228403 1228438 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:68:5176:4039#AGCTAT/1 0 36 0.0000 1 36 36 0 0 0 - 2431937 2431972 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M36; >HWI-EAS283_0008:8:87:15139:11894#AGCTAT/1 1 34 0.0000 1 36 35 1 0 0 + 2084402 2084437 >gi|27466918|ref|NC_004461.1| Staphylococcus epidermidis ATCC 12228, complete genome M24;S1;M11;