gene_id sample_1 sample_2 status value_1 value_2 log2_fold_change test_stat p_value q_value significant gene_short_name XLOC_000894 Sk Sk_Pg OK 3089410 964683 -1.6792 -2.51544 0.00105 0.0165425 yes "SSA_1964,SSA_1965,SSA_1972,SSA_1973,SSA_1974,SSA_1975,SSA_1976,SSA_1978,SSA_1981,SSA_1982,asp,ilvA,ilvB,ilvC,ilvH,rpmB" XLOC_000390 Sk Sk_Pg OK 312731 166287 -0.911247 -147.578 8.00E-04 0.0139167 yes SSA_1434 XLOC_000831 Sk Sk_Pg OK 306316 133215 -1.20126 -237.538 5.00E-05 0.00126515 yes csbD XLOC_000376 Sk Sk_Pg OK 127032 56263 -1.17493 -48.4958 5.00E-05 0.00126515 yes rpmE2 XLOC_000141 Sk Sk_Pg OK 106444 44545.9 -1.25673 -19.9867 0.00095 0.0155539 yes "SSA_0441,SSA_0442,SSA_0443,SSA_0445,hutI,rpsF,rpsR,ssb" XLOC_000636 Sk Sk_Pg OK 65498.5 29619.6 -1.14491 -125.567 5.00E-05 0.00126515 yes SSA_0889 XLOC_000322 Sk Sk_Pg OK 38148.4 19907.4 -0.938319 -2.61135 0.0041 0.0456467 yes coaA XLOC_000848 Sk Sk_Pg OK 36932.4 14520.6 -1.34679 -45.4323 5.00E-05 0.00126515 yes SSA_1786 XLOC_000588 Sk Sk_Pg OK 35494.3 17897.2 -0.987855 -2.4137 0.0038 0.0440694 yes SSA_0513 XLOC_000698 Sk Sk_Pg OK 33387.8 15358.8 -1.12025 -45.4322 5.00E-05 0.00126515 yes SSA_1309 XLOC_000818 Sk Sk_Pg OK 21230.5 10544.6 -1.00963 -4.02551 5.00E-05 0.00126515 yes SSA_1689 XLOC_000130 Sk Sk_Pg OK 18712.2 10124 -0.886199 -19.6101 1.00E-04 0.00238571 yes SSA_0394 XLOC_000084 Sk Sk_Pg OK 17678.9 4023.4 -2.13554 -2.424 5.00E-05 0.00126515 yes int XLOC_000699 Sk Sk_Pg OK 7742.43 3433.16 -1.17325 -19.3783 5.00E-05 0.00126515 yes rpsP XLOC_000289 Sk Sk_Pg OK 6534.51 11749.7 0.846473 3.33097 5.00E-05 0.00126515 yes eno XLOC_000772 Sk Sk_Pg OK 6321.98 3816.75 -0.728032 -9.69762 0.00175 0.025636 yes SSA_1465 XLOC_000712 Sk Sk_Pg OK 4276.84 1185.84 -1.85064 -5.66085 1.00E-04 0.00238571 yes "SSA_1340,SSA_1346,carA,carB,phnA,pyrB,pyrP,pyrR" XLOC_000681 Sk Sk_Pg OK 2124.22 151.764 -3.80703 -22.2321 5.00E-05 0.00126515 yes pyrF XLOC_000680 Sk Sk_Pg OK 1923.19 108.6 -4.14641 -15.0343 5.00E-05 0.00126515 yes pyrE XLOC_000009 Sk Sk_Pg OK 1783.72 15275.7 3.09828 93.9335 5.00E-05 0.00126515 yes SSA_0043 XLOC_000277 Sk Sk_Pg OK 1672.14 1018.09 -0.715824 -3.1285 8.00E-04 0.0139167 yes "ftsE,ftsX" XLOC_000433 Sk Sk_Pg OK 1663.31 930.46 -0.838039 -2.34015 0.0025 0.0326172 yes treR XLOC_000847 Sk Sk_Pg OK 1440.36 2249.58 0.643227 3.33967 0.00335 0.0405399 yes "SSA_1781,SSA_1782,SSA_1783,murI,xerD" XLOC_000391 Sk Sk_Pg OK 1278.52 390.588 -1.71075 -3.79996 5.00E-05 0.00126515 yes rexA XLOC_000063 Sk Sk_Pg OK 1113.45 700.83 -0.667898 -2.60294 0.004 0.0451351 yes "SSA_0179,epsC" XLOC_000807 Sk Sk_Pg OK 919.724 1654.9 0.847469 2.68648 5.00E-05 0.00126515 yes cpbA XLOC_000682 Sk Sk_Pg OK 853.65 149.472 -2.51377 -8.90271 5.00E-05 0.00126515 yes pyrD XLOC_000285 Sk Sk_Pg OK 824.207 447.705 -0.880457 -2.74536 0.00015 0.00329605 yes SSA_0880 XLOC_000010 Sk Sk_Pg OK 755.617 1384.34 0.873471 2.32558 0.0013 0.0193839 yes SSA_0044 XLOC_000007 Sk Sk_Pg OK 686.755 3907.07 2.50822 43.9939 0.00035 0.00679651 yes SSA_0041 XLOC_000012 Sk Sk_Pg OK 669.734 4040.78 2.59297 11.6283 5.00E-05 0.00126515 yes purB XLOC_000872 Sk Sk_Pg OK 629.019 1021.14 0.699002 4.09588 0.00245 0.0324722 yes SSA_1865 XLOC_000327 Sk Sk_Pg OK 628.858 1136.42 0.853688 3.78946 2.00E-04 0.004175 yes "SSA_1039,SSA_1040" XLOC_000454 Sk Sk_Pg OK 617.059 1128.13 0.870455 2.9604 0.00225 0.0303024 yes SSA_1920 XLOC_000120 Sk Sk_Pg OK 513.486 1079.38 1.0718 3.02731 5.00E-05 0.00126515 yes "SSA_0376,SSA_0377" XLOC_000072 Sk Sk_Pg OK 471.189 222.918 -1.07979 -4.57662 0.00035 0.00679651 yes SSA_0193 XLOC_000852 Sk Sk_Pg OK 458.551 263.195 -0.800952 -3.45814 0.00195 0.0275975 yes SSA_1790 XLOC_000452 Sk Sk_Pg OK 451.506 871.273 0.94838 3.42974 5.00E-05 0.00126515 yes SSA_1918 XLOC_000679 Sk Sk_Pg OK 450.422 214.072 -1.07318 -3.61533 0.00015 0.00329605 yes "SSA_1238,SSA_1239" XLOC_000789 Sk Sk_Pg OK 435.376 779.635 0.840539 3.90236 7.00E-04 0.0129889 yes "SSA_1558,SSA_1559" XLOC_000275 Sk Sk_Pg OK 409.373 198.649 -1.04319 -3.47906 0.00115 0.0177824 yes SSA_0867 XLOC_000889 Sk Sk_Pg OK 393.874 706.676 0.843314 3.48378 5.00E-05 0.00126515 yes SSA_1945 XLOC_000453 Sk Sk_Pg OK 386.379 900.643 1.22094 4.8075 5.00E-05 0.00126515 yes SSA_1919 XLOC_000735 Sk Sk_Pg OK 384.296 696.876 0.858685 3.25657 0.00095 0.0155539 yes "SSA_1412,SSA_1413" XLOC_000318 Sk Sk_Pg OK 379.643 638.767 0.750649 2.48599 0.0026 0.0334 yes "SSA_1012,SSA_1013,SSA_1014,SSA_1016,SSA_1017,ubiA" XLOC_000123 Sk Sk_Pg OK 350.372 168.755 -1.05396 -2.9646 0.00295 0.037322 yes "SSA_0380,SSA_0381" XLOC_000683 Sk Sk_Pg OK 324.157 145.027 -1.16038 -6.00592 0.0034 0.0405571 yes pyrK XLOC_000741 Sk Sk_Pg OK 287.513 474.163 0.721755 3.59714 0.0037 0.0435141 yes metA XLOC_000677 Sk Sk_Pg OK 278.822 134.184 -1.05514 -3.52829 0.00305 0.0380112 yes mutX XLOC_000071 Sk Sk_Pg OK 246.961 407.017 0.720809 2.72537 0.00225 0.0303024 yes ackA XLOC_000530 Sk Sk_Pg OK 243.301 107.584 -1.17728 -2.46215 5.00E-05 0.00126515 yes SSA_2405 XLOC_000117 Sk Sk_Pg OK 239.478 680.922 1.5076 6.33366 5.00E-05 0.00126515 yes pyrDA XLOC_000773 Sk Sk_Pg OK 221.819 364.677 0.717237 2.31776 0.0019 0.0273534 yes tyrA XLOC_000121 Sk Sk_Pg OK 215.185 101.974 -1.07738 -4.61933 8.00E-04 0.0139167 yes SSA_0378 XLOC_000748 Sk Sk_Pg OK 205.251 480.953 1.22851 4.77376 5.00E-05 0.00126515 yes "SSA_1429,elaC" XLOC_000749 Sk Sk_Pg OK 198.969 365.107 0.875776 3.20706 0.00095 0.0155539 yes "SSA_1431,hflX" XLOC_000774 Sk Sk_Pg OK 188.097 505.397 1.42594 5.01645 5.00E-05 0.00126515 yes aroC XLOC_000300 Sk Sk_Pg OK 178.848 305.709 0.773429 2.18961 0.00015 0.00329605 yes crpC XLOC_000090 Sk Sk_Pg OK 171.171 286.106 0.741116 2.50218 0.00125 0.0189773 yes pepO XLOC_000656 Sk Sk_Pg OK 165.99 389.379 1.23008 4.53243 5.00E-05 0.00126515 yes SSA_1125 XLOC_000274 Sk Sk_Pg OK 164.695 510.389 1.6318 6.56238 5.00E-05 0.00126515 yes pacL XLOC_000008 Sk Sk_Pg OK 159.433 1106.82 2.79539 11.6596 5.00E-05 0.00126515 yes SSA_0042 XLOC_000704 Sk Sk_Pg OK 156.657 357.12 1.1888 3.75191 3.00E-04 0.00610976 yes SSA_1315 XLOC_000505 Sk Sk_Pg OK 132.485 29.5728 -2.16349 -4.43361 0.0021 0.029225 yes cadD2 XLOC_000675 Sk Sk_Pg OK 125.556 1025.66 3.03015 11.5903 5.00E-05 0.00126515 yes SSA_1234 XLOC_000088 Sk Sk_Pg OK 113.549 192.733 0.763286 1.93596 4.00E-04 0.00759091 yes SSA_0257 XLOC_000118 Sk Sk_Pg OK 96.1204 374.857 1.96343 7.3678 5.00E-05 0.00126515 yes SSA_0374 XLOC_000544 Sk Sk_Pg OK 95.3218 293.121 1.62062 4.03095 5.00E-05 0.00126515 yes tpx XLOC_000737 Sk Sk_Pg OK 91.8872 176.356 0.940557 3.22376 0.001 0.0160577 yes SSA_1415 XLOC_000159 Sk Sk_Pg OK 62.2265 30.5938 -1.02429 -2.53272 5.00E-05 0.00126515 yes gtfP XLOC_000299 Sk Sk_Pg OK 60.4032 94.2082 0.641228 1.99802 0.0031 0.0380662 yes crpB XLOC_000899 Sk Sk_Pg OK 53.6184 133.182 1.3126 4.02447 0.0039 0.0446096 yes SSA_1987 XLOC_000006 Sk Sk_Pg OK 26.0515 2587.49 6.63405 12.9083 5.00E-05 0.00126515 yes "purE,purK" XLOC_000005 Sk Sk_Pg OK 14.3972 862.627 5.90488 10.7351 5.00E-05 0.00126515 yes purD XLOC_000127 Sk Sk_Pg OK 6.92877 47.2566 2.76985 3.87932 2.00E-04 0.004175 yes spxB