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Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	02-24-2014 05:28 PM by Brian Bushnell	6	2,014
Sticky: New Resources for 1000 Genomes ( 1 2) laura	12-05-2013 01:37 AM by laura	35	14,172
Sticky: SEQwiki dan	08-09-2010 10:56 PM by scofield_gao	3	16,440
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 05:45 PM by ECO	236	317,003

Cuffdiff p-value distributions and replicates dlawrence	Today 10:18 AM by haggardd	6	1,046
Single position mismatch agglomerate after alignment Thias	Today 10:16 AM by Thias	6	130
RNA-Seq Pathway and Gene-set Analysis Workflows in R/Bioconductor with GAGE/Pathview ( 1 2) bigmw	Today 07:32 AM by shocker8786	21	2,657
VarScan output Giffredo	Today 07:03 AM by Giffredo	0	56
How do I go about converting a BCF file to a VCF file? ( 1 2) prs321	Today 06:47 AM by Giffredo	20	589
One density plots for multiple samples osha84	Today 05:43 AM by TiborNagy	3	144
Find & download exact bed file corresponding to UCSC browser track afkoeppel	Today 05:38 AM by afkoeppel	3	335
Problem running bedtools (fastFromBed) NGS_New_User	Today 05:23 AM by TiborNagy	1	121
Validating and Evaluating the Quality of an NGS pipeline Nilaksha	Today 05:17 AM by TiborNagy	1	84
Oases; merging two Oases assembled transcriptomes NGSwork	Today 04:44 AM by bioBob	2	91
mpileup to vcf komalsrathi	Today 03:53 AM by Jetse	1	601
Bedtools - complementBed not working properly Coryza	Today 03:26 AM by Coryza	1	60
comparing results by cuffdiff, edgeR, DESeq PFS	Today 03:01 AM by Thias	5	3,310
Reading a vcf - genotypes Elsie	Today 01:58 AM by dpryan	1	86
unix version mmmm	Today 01:48 AM by dpryan	4	138
Failed chip-seq experiments Anomilie	Today 12:32 AM by ffinkernagel	2	151
MIRA: "zsh: killed" crash cwgao	Today 12:16 AM by maubp	1	107
MuSiC tool integration to Galaxy NGS dokadya	Yesterday 08:39 PM by dokadya	0	98
Estimating mutation age Carlito86	Yesterday 06:28 PM by Carlito86	0	95
evolutionary amino acid position conservation BioSlayer	Yesterday 04:44 PM by BioSlayer	2	166
Very high coverage w/Ion Torrent megster	Yesterday 03:43 PM by megster	3	196
Trying to use OncoSNP-SEQ for CNV lethalfang	Yesterday 03:35 PM by lethalfang	0	82
Expanding the coverage of an old assembly Dagga	Yesterday 12:47 PM by Dagga	5	154
htseq-count paolo.kunder	Yesterday 12:02 PM by wwq413	9	4,691
Poblem: New application with Cytoscape asma	Yesterday 11:28 AM by asma	2	153
GSNAP error aaron.odell	Yesterday 09:56 AM by wendy_cityu	3	291
Bowtie alignment Bakhtiyar Taghizada	Yesterday 09:07 AM by dpryan	1	102
sam files convert to bam files error awayihaha	Yesterday 09:03 AM by awayihaha	7	134
SOAPdenovo and FASTA files - Newbie question Gregory Peterson	Yesterday 08:44 AM by Topulaneus-Hattum	4	694
File not found on running blastall? arkilis	Yesterday 07:56 AM by westerman	6	190

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