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Sticky: New Resources for 1000 Genomes ( 1 2) laura	03-15-2013 11:52 AM by jgibbons1	31	7,371
Sticky: SEQwiki dan	08-09-2010 10:56 PM by scofield_gao	3	10,296
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 05:45 PM by ECO	236	256,748

SSPACE_Basic_v2.0.pl bug? mxr1895	Today 08:33 PM by mxr1895	0	9
Extracting REF and ALT from VCF kasthuri	Today 08:16 PM by swbarnes2	4	82
Unusually high duplicated Reads in Mate Pair Library fahmida	Today 07:56 PM by Wallysb01	8	182
Making Jalview less annoying? A_Morozov	Today 06:37 PM by A_Morozov	2	107
Good peak finders for methylation data? Heisman	Today 06:32 PM by Heisman	2	83
[EdgeR] exactTest dispersion="common" syintel87	Today 06:12 PM by syintel87	0	41
About negative binomial distribution fit getzabeth	Today 05:26 PM by timydaley	1	107
Extract allele frequencies from a VCF file id0	Today 03:48 PM by id0	0	68
Filtering sequencing errors msl1y11	Today 03:43 PM by SNPsaurus	3	105
BFAST, Could not read in buffer robertthebob1	Today 03:18 PM by robertthebob1	0	49
mpileup with & without -q: odd result? afkoeppel	Today 03:17 PM by BAMseek	1	61
Differential gene expression analysis colaneri	Today 01:51 PM by colaneri	8	365
First 20bp of MiSeq reads are weird reubennowell	Today 01:28 PM by nickloman	7	148
Tools to generate VCF from two FASTA, or mutant FASTA from Ref FASTA and VCF? jeffseq	Today 01:03 PM by jeffseq	0	62
now what? (sequence capture data analysis) ajthomas	Today 12:08 PM by kmcarr	11	372
SRA -> FastQ, Problem with SRA toolkit? kelseyca	Today 11:59 AM by kelseyca	12	98
Ray: a NEW MPI-based 100% parallel genome assembler ( 1 2 3 ... Last Page) seb567	Today 11:51 AM by akshaya.ramesh	242	36,013
samtools produces mpileup with extremely large string curious2	Today 11:51 AM by curious2	0	53
How to extract a regional consensus sequence of reads from BAM file jeffseq	Today 10:52 AM by jeffseq	3	368
Analysis of RNA-seq data priya	Today 10:42 AM by mbblack	8	126
Clustering RNA-Seq RPKM/ReadsCount issues Amative	Today 10:36 AM by Amative	0	72
VCF Indel encoding question darren.obbard	Today 09:34 AM by darren.obbard	0	49
De Novo Assembly G_mich	Today 09:27 AM by G_mich	2	80
Opening non indexed BAM file Itay.zemach	Today 08:21 AM by RDW	6	241
Merging paired end reads for BLAST JJenks	Today 07:43 AM by JJenks	8	490
differential gene expression without replicates: edgeR, DESeq? mrfox	Today 07:20 AM by chrisbala	12	1,159
how to use bash script to make iterative loop through directory with two file types jddavis	Today 07:02 AM by jddavis	2	136
DEXSeq log2 fold change error agne	Today 06:54 AM by agne	3	77
Tophat uniquely mapped reads mrfox	Today 05:58 AM by rahilsethi	2	1,093
How to measure the similarity? Fad2012	Today 03:39 AM by GenoMax	1	88

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