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Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	05-27-2014 10:47 PM by karencmartin	7	34,174
Sticky: New Resources for 1000 Genomes ( 1 2) laura	12-05-2013 02:37 AM by laura	35	21,516
Sticky: SEQwiki dan	08-09-2010 11:56 PM by scofield_gao	3	21,475
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 06:45 PM by ECO	236	380,873

Tool to estimate genetic heterogeneity using SNP NinaG	Today 10:43 PM by NinaG	2	132
Installing Pysam for windows Mark2	Today 08:02 PM by Mark2	0	49
BWA "Error generating alignments" cheezemeister	Today 04:07 PM by Brian Bushnell	5	198
DESeq2 Anomaly/Issue? The_Corsair	Today 09:48 AM by The_Corsair	2	163
Help with sam flags scami	Today 06:05 AM by capricy	6	302
Samtools flagstat on Tophat generated .bam file rg_gis	Yesterday 10:35 PM by archana2287	6	5,117
ROC curve analysis of short read aligners Mchicken	Yesterday 06:08 PM by monia	6	554
Amazon Cloud question slny	Yesterday 03:27 PM by cascoamarillo	3	246
how to extract both ends mapped to different reference from bam jmartin	Yesterday 03:16 PM by dpryan	3	180
Htseq question zjrouc	Yesterday 01:19 PM by dpryan	1	117
Trimmomatic error ( 1 2) dvanic	Yesterday 12:56 PM by mslider	30	5,694
Introducing BBDuk: Adapter/Quality Trimming and Filtering ( 1 2 3 ... Last Page) Brian Bushnell	Yesterday 12:07 PM by Brian Bushnell	107	8,439
HTSeq 0.6.1 Maximum alignment buffer size exceeded error dvanic	Yesterday 11:49 AM by catbus	14	2,494
HTSeq: A Python framework to work with high-throughput sequencing data ( 1 2 3 ... Last Page) Simon Anders	Yesterday 11:40 AM by zjrouc	187	42,511
Program for aligning particular set of reads to an entire NGS dataset Alun3.1	Yesterday 10:46 AM by Brian Bushnell	4	234
Reads align in an RF orientation in Nextera paired-end sequencing? jmacrm91	Yesterday 10:35 AM by Brian Bushnell	1	131
best assembler for 160PE and 100PE reads horvathdp	Yesterday 09:46 AM by horvathdp	0	144
CummeRbund Error Neberir	Yesterday 07:28 AM by Neberir	0	85
DESeq analysis with ERCC RNA spike ins swebb	Yesterday 07:00 AM by aggp11	7	1,515
read counts per transcript, edgeR, tophat ( 1 2 3) chrisbala	Yesterday 05:51 AM by wanfahmi	46	15,965
Indel detection in NGS high coverage amplicons alexholman	Yesterday 05:50 AM by maxsalm	12	442
Consistent peaks from Histone Chip datasets priya	Yesterday 04:57 AM by priya	0	132
Indels in bacterial RNA-seq data markusli	02-26-2015 11:51 PM by dpryan	3	233
ddRADSeq data analysis for population structure (Stacks, dDocent...) yarinka	02-26-2015 05:55 PM by etwatson	7	1,119
bwa/picard issue cedance	02-26-2015 05:41 PM by etwatson	11	3,567
StringTie software? jake13	02-26-2015 05:40 PM by robp	1	149
Introducing BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries Brian Bushnell	02-26-2015 04:03 PM by Brian Bushnell	13	1,381
BBMap (aligner for DNA/RNAseq) is now open-source and available for download. ( 1 2 3 ... Last Page) Brian Bushnell	02-26-2015 03:22 PM by rkanwar	189	16,570
SNPs and their neighboring nucleotides exo	02-26-2015 02:15 PM by dziq	1	145
A question about under-representaed and over-represented of GO term bongbimit	02-26-2015 01:56 PM by bongbimit	0	136

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