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Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	05-27-2014 09:47 PM by karencmartin	7	28,999
Sticky: New Resources for 1000 Genomes ( 1 2) laura	12-05-2013 01:37 AM by laura	35	19,962
Sticky: SEQwiki dan	08-09-2010 10:56 PM by scofield_gao	3	20,452
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 05:45 PM by ECO	236	357,610

HTSeq: A Python framework to work with high-throughput sequencing data ( 1 2 3 ... Last Page) Simon Anders	Today 02:53 PM by apredeus	169	37,916
How to run pindel with multithreading? nasreddin	Today 02:11 PM by KaiYe	2	113
WHEN to merge data from single library run on multiple lanes? jullee	Today 01:36 PM by kmcarr	4	129
Introducing BBDuk: Adapter/Quality Trimming and Filtering ( 1 2) Brian Bushnell	Today 01:04 PM by Brian Bushnell	23	2,009
MIRA 4.0 denovo PacBio FastQ haudi	Today 12:00 PM by lhon	7	265
BWA MEM mate pair incorrect insert sizes? hartmaier	Today 11:38 AM by Brian Bushnell	7	877
sum of FPKMs? dlepe	Today 11:05 AM by dlepe	6	203
Cuffdiff normalization using 2 conditions lucasmiguel	Today 10:32 AM by id0	4	129
SOAPdenovo pregraph read counts id0	Today 10:27 AM by id0	3	657
Minia-genome assembler bioman1	Today 10:15 AM by rchikhi	2	248
Finding CRISPR gRNA off-target matches using NGS mappers shambo	Today 09:39 AM by Brian Bushnell	5	160
Shotgun sequencing mido1951	Today 08:51 AM by GenoMax	3	97
run cuffmerge gives such error message liweixie	Today 07:45 AM by BADE	2	466
Best programs/methods for looking at mapped coverage? (Mapping whole genome data) Genomics101	Today 07:20 AM by jwfoley	9	261
Mira assembly jmpi	Today 06:16 AM by westerman	11	2,547
Extract flanking sequence of SNP call JdeBruin	Today 06:03 AM by westerman	1	89
Demultiplexing 454 inesdesantiago	Today 04:44 AM by inesdesantiago	1	89
[Tophat2] - Warning: junction database is empty! Puhekupla	Today 02:40 AM by wokai001	2	245
Demultiplexing qseq shadow19c	Today 01:34 AM by mastal	5	398
How to get the mutated protein sequence from the DNA mutation information? lix	Today 01:04 AM by Jeremy	2	141
Hi-C seq data download att2011	Yesterday 11:39 PM by dpryan	3	178
CNV-seq output (how to know insertion or deletion) younko	Yesterday 05:39 PM by arcolombo698	4	209
Samtools and intrasample diversity mstagliamonte	Yesterday 01:34 PM by mstagliamonte	2	118
Puzzling to SOLID data analysis Lv Ray	Yesterday 11:51 AM by Brian Bushnell	3	142
SNPs call mmmm	Yesterday 10:28 AM by BurlEarl	2	149
Software to filter errors in fastq files? ( 1 2) sbberes	Yesterday 09:37 AM by mattbawn	23	3,111
Bowtie tags for dUTP strand specifc RNA-seq BacanBan	Yesterday 09:10 AM by dpryan	7	1,995
ROC curve analysis of short read aligners Mchicken	Yesterday 08:02 AM by Brian Bushnell	3	225
samtools mpileup min depth option? jmhenke	Yesterday 08:00 AM by dpryan	1	99
couldn't run CNVnator ( 1 2) menenuh	Yesterday 06:50 AM by clarissaboschi	37	6,737

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