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Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	02-24-2014 05:28 PM by Brian Bushnell	6	3,349
Sticky: New Resources for 1000 Genomes ( 1 2) laura	12-05-2013 01:37 AM by laura	35	14,455
Sticky: SEQwiki dan	08-09-2010 10:56 PM by scofield_gao	3	16,627
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 05:45 PM by ECO	236	327,418

BBMap (aligner for DNA/RNAseq) is now open-source and available for download. ( 1 2) Brian Bushnell	Today 06:51 AM by GenoMax	27	1,337
Which strategy or strategies should I use? qiuyuxinhan	Today 06:47 AM by qiuyuxinhan	4	69
problem for running ANNOVAR ( 1 2) Jane M	Today 06:44 AM by qiuyuxinhan	23	3,943
SOAPdenovo2 in sleeping state for 4 days illinu	Today 06:32 AM by illinu	2	129
Problem with HTSeq in RIPseq pipeline Rivalyn	Today 06:22 AM by dpryan	7	151
DESeq2 Contrast Ruhi	Today 06:12 AM by Ruhi	6	107
annovar error with table_annovar.pl line 214 qiuyuxinhan	Today 06:11 AM by qiuyuxinhan	1	86
parse xml to tabular format simpson	Today 06:03 AM by amitbik	17	1,265
RNA-Seq sequence counts fastq and BAM files adrian	Today 05:44 AM by adrian	4	134
CEGMA error condomitti	Today 04:53 AM by condomitti	6	144
denovo assembly and best coverage mmmm	Today 03:13 AM by mmmm	4	150
fastq-mcf paired end adapter trimming gevielr	Today 02:52 AM by mmmm	4	444
[Annovar] Annotate SNPs in Samples Coryza	Today 01:32 AM by Coryza	2	121
Get igv coverage track ( 1 2) obk	Today 12:44 AM by Giffredo	22	2,055
design tetra-primer ARMS PCR lehang	Yesterday 11:46 PM by lehang	0	59
BLAST alignment length morning latte	Yesterday 11:43 PM by LeightonP	2	113
RepeatMasker & RepeatScout ( 1 2) Zimbobo	Yesterday 10:24 PM by sunnyseq	33	6,599
Online Variant Annotation Tool kjaja	Yesterday 09:11 PM by rbagnall	2	136
FPKM values differ for sample sample between comparisons? beeman	Yesterday 08:40 PM by beeman	2	109
bwa-meth and bs-seq comparison brentp	Yesterday 05:39 PM by adeirossi	11	616
Trinity: Combining PE and SE strand-specific reads? oligo	Yesterday 05:23 PM by oligo	6	209
Mosaik Aligner/IUPAC codes lwhitmore	Yesterday 05:02 PM by lwhitmore	14	268
Issue with BiSeq for DMR analysis shocker8786	Yesterday 02:38 PM by dpryan	1	92
Bowtie 2.2.0 giorgifm	Yesterday 02:10 PM by dpryan	6	511
best N50 mmmm	Yesterday 12:05 PM by kbradnam	2	140
BWA-MEM and X0/X1/etc flags mturchin20	Yesterday 11:57 AM by tnp	4	4,173
Trouble in converting UCSC transcripts IDs watermark	Yesterday 11:16 AM by GenoMax	8	180
Metagenome Comparisons in MG-RAST sfranzenburg	Yesterday 10:47 AM by sfranzenburg	0	61
ChIPQC: a package for assessing quality of ChIP-seq samples and experiments rory	Yesterday 10:02 AM by crazyhottommy	1	114
HTSeq 0.6.1 Maximum alignment buffer size exceeded error dvanic	Yesterday 08:01 AM by Simon Anders	6	427

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