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Rating Thread / Thread Starter	Last Post	Replies	Views
infering isoforms in merged transcriptome Fernando_Rodriguez	01-29-2019 11:20 AM by dongilbert	1	347
De novo assembly of ATAC-seq Juanslugo	01-29-2019 10:56 AM by Juanslugo	0	162
Thoughts on combining PE runs to improve assemblies? ctseto	12-06-2018 07:03 AM by ctseto	0	1,136
OneMap for genetic mapping of outbred crosses - anyone? MetteHHH	12-05-2018 06:45 PM by Javalera	16	6,595
Denovo identification of Centromere and Telomere Jassipox	09-17-2018 01:30 PM by PhaseGenomics	1	3,931
Mapsplice Sealzad	04-05-2018 08:31 AM by Sealzad	0	3,176
long-range technologies for genome scaffolding ybukhman	02-10-2018 08:48 AM by ybukhman	2	2,206
Low K-mer coverage from a SPAdes assembly berthenet	02-05-2018 12:59 AM by berthenet	2	2,096
Insert size important? 454andSolid	12-27-2017 02:33 AM by raman91	3	7,351
Is it possible to evaluate genome size Using degradated DNA？ huan	11-22-2017 01:45 AM by huan	0	1,817
Hello Noor	11-13-2017 01:42 PM by Noor	0	1,642
(Problem) Prediction rRNA with rnammer 1.2 Hyunmin	06-17-2017 07:04 AM by Jassipox	4	4,948
MaSuRCA Assembler runCA Error rafaykhan	02-23-2017 07:11 PM by drunk_coder	3	4,348
Oases: De novo transcriptome assembly of very short reads ( 1 2 3) lcollado	02-07-2017 09:48 AM by smurmu	58	40,827
Ray : Segmentation fault (11) Nagesh	02-02-2017 05:22 AM by dorix	3	5,021
Kmer genome size estimation so much lower than the actual GAFA	01-22-2017 12:29 AM by Brian Bushnell	3	2,864
Large discrepancy between de novo assembly versus actual biological genome size NYGen	01-21-2017 12:19 PM by NYGen	5	4,523
Problem with running PrepareAllPathsInputs.pl in Allpaths LG marrakesh	12-20-2016 06:20 PM by RemitoAmigo	2	4,136
Taipan !!!!!!!!! rafaykhan	12-12-2016 04:23 AM by GenoMax	1	2,526
Question regarding Zygosity variant calling interpretation - homozygote variants NGS_New_User	11-21-2016 08:29 AM by NGS_New_User	0	2,393
Is ddRAD sequencing strand-specific? carladosanjos	11-17-2016 12:38 AM by nucacidhunter	4	2,638
batch effect in radseq oselm	11-10-2016 07:43 PM by SNPsaurus	1	2,443
Min/Max allowable Ns in reads jfo	10-16-2016 02:40 PM by GenoMax	1	2,475
Minimum contig coverage to keep sebl	09-10-2016 11:36 PM by Brian Bushnell	3	4,178
bait design for seqCapture AKroxy	07-29-2016 11:48 AM by AKroxy	2	3,065
MaSuRCA adapter trimming yvan.wenger	07-07-2016 08:45 AM by yvan.wenger	1	2,617
Merging reads for denovo assembly Niranjanks	05-18-2016 11:09 AM by westerman	1	2,870
denovo mutations Mr.Zurich1992	04-13-2016 03:16 PM by Mr.Zurich1992	2	3,065
Workflow for de novo transcriptome + GO + DE, what you recommend ? Romualdo	03-28-2016 02:06 PM by Romualdo	0	2,604
localized consensus build instead of scaffolding sfh838t	03-16-2016 07:40 AM by Markiyan	1	3,042

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