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Sticky: New Resources for 1000 Genomes ( 1 2) laura	04-15-2017 08:48 AM by lucasrocha	36	57,394
Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	01-15-2016 11:34 PM by locday123	8	84,765
Sticky: SEQwiki dan	08-09-2010 10:56 PM by scofield_gao	3	43,751
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 05:45 PM by ECO	236	515,956

Trimmomatic but no trimming Saeideh	09-28-2015 11:40 PM by Saeideh	6	1,000
Genome assembly workflows for NGS elisacarli	09-28-2015 11:32 PM by SylvainL	2	638
bedtools sort by faidx cmccabe	09-28-2015 12:42 PM by HESmith	3	1,114
Error in normalizeDoubleBracketSubscript anagari	09-28-2015 12:03 PM by anagari	0	826
sorting a BAM produces a smaller file than the original oiiio	09-28-2015 11:57 AM by gringer	18	12,052
DESeq2 multivariate analysis - retrieving certain stats Boel	09-28-2015 11:23 AM by Boel	0	733
cummeRbund error dianaabouelhassan	09-28-2015 08:31 AM by dianaabouelhassan	0	514
correlation in per base sequence quality profiles of multiplexed samples. sridharacharya	09-28-2015 07:49 AM by GenoMax	3	618
Newbler default settings? -- Any papers SDPA_Pet	09-28-2015 07:31 AM by SDPA_Pet	12	1,466
Questions about Blast on Unix Shell ( 1 2) Naphtap	09-28-2015 04:04 AM by GenoMax	21	1,882
Biopython Help asf33	09-27-2015 12:47 PM by maubp	1	687
how to speed up blast+ ( 1 2 3) yaximik	09-27-2015 04:22 AM by GenoMax	50	12,301
Error: Could not find Bowtie 2 index files (–p.*.bt2) taehee	09-26-2015 08:38 PM by taehee	7	1,650
bedtools 2.25 vs bedtools2.20 output of coverageBed cmccabe	09-26-2015 08:28 AM by cmccabe	14	1,624
chr20 length problem Waqasuddin Khan	09-26-2015 08:27 AM by Richard Finney	2	1,041
TE-tracker: cannot use slclust xiao	09-26-2015 06:11 AM by xiao	4	881
Large germline vcf sources? Remove some samples? Richard Finney	09-26-2015 05:22 AM by Richard Finney	0	498
Deseq2 multifactor analysis genomica	09-26-2015 01:03 AM by genomica	6	949
The most expressed genes Saeideh	09-26-2015 12:39 AM by Saeideh	0	541
Why sum technical replicates instead of averaging (and rounding) for DESeq? friducha	09-25-2015 10:03 PM by dpryan	5	1,897
Transforming .ped files back to .vcf with original chrom. name mjudkins	09-25-2015 06:15 PM by mjudkins	0	863
Bedtools question sekhwal	09-25-2015 09:14 AM by GenoMax	1	492
tool for filtering NGS data mido1951	09-25-2015 07:59 AM by GenoMax	3	545
N50 statistic & L50 statistic moolder	09-25-2015 07:36 AM by lorendarith	3	7,426
Newbie Question: How to count genome region coverage and CpG sites coverage? illuminaGA	09-25-2015 07:25 AM by illuminaGA	0	534
Multiple blast hits in single genome - what could be the cause barnacules	09-25-2015 06:22 AM by GenoMax	3	621
redhat versus ubuntu cmccabe	09-25-2015 03:54 AM by cmccabe	6	927
junction bed file from STAR frymor	09-25-2015 02:05 AM by krespim	1	1,673
de novo contigs don't match mapped reads bdorsey	09-24-2015 11:39 PM by SylvainL	1	728
strange output from RSEM tujchl	09-24-2015 06:20 PM by tujchl	4	950

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