Genomic Resequencing

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Genomic Resequencing

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Poll: VCF to Circos format(s) bzdyelnik	03-01-2022 09:41 PM by ambu	5	12,228
IGV Green and Red reads at same locus. WGS	10-25-2021 09:29 AM by WGS	0	3,757
Mutational Analysis: Identifying SNVs on demand thezgabby	05-10-2021 09:49 AM by thezgabby	0	13,106
What are the applications of CRISPR Based Microbe Genome Editing Service wendywilson	10-27-2020 12:39 AM by wendywilson	0	4,987
Find SNPs in related strains dsybers	10-09-2019 08:45 AM by dsybers	0	12,258
How to estimate genetic variation in a population with RNASeq data? dacotahm	09-26-2019 08:01 AM by dacotahm	0	5,387
Problem in mpileup file where size of sequence does not match size of quality cryptodice	08-04-2019 07:16 PM by cryptodice	0	6,372
Reliability of short insert sizes lburmz	05-14-2019 12:57 AM by lburmz	0	6,532
Variant and Genotype calling Alex_Dor	04-12-2019 05:22 AM by Alex_Dor	0	6,207
SNP calling on samples sequenced with different technology weehzer	09-10-2018 03:49 AM by weehzer	0	9,804
Calculate probability of a given sequence _anli	08-23-2018 08:24 AM by _anli	0	7,001
PL high support for each GT for all SNPS htetre	08-20-2018 11:05 AM by htetre	2	7,263
Experiences with SeqCap EZ Prime j_he	08-16-2018 03:29 PM by j_he	0	6,923
Adding GT tag to Strelka Output erichpeterson	08-09-2018 08:33 AM by GobiJerboa	1	10,014
The R-square between coverage and short variants number Chen-Tau Lin	07-31-2018 07:59 PM by Chen-Tau Lin	0	6,739
Control sample for human germline SNP discovery? whe	07-15-2018 06:11 PM by whe	0	7,416
SureSelect XT Probes icahn_seq	02-04-2018 08:28 AM by icahn_seq	2	9,558
SNPs at Interval Boundaries in GATK HaplotypeCaller peterlchang	10-24-2017 01:53 PM by peterlchang	0	8,940
Chromosomal translocation, which NGS method appropriate deepbiomed	09-13-2017 06:09 AM by r.rosati	4	9,854
mpileup only calling snps for chr1 not entire genome htetre	06-20-2017 01:56 PM by htetre	1	7,812
Finding two strains of a genome having SNPs/SNVs in their repeat regions smh.oloomi	06-10-2017 08:52 PM by smh.oloomi	0	7,796
Calling variants when mapping reads from different species than reference gruberjd	05-19-2017 11:52 AM by Brian Bushnell	3	9,590
Panel Validation using NA12878 DNA NielQC	05-05-2017 03:36 AM by NielQC	0	8,444
How to generate VCF from HISAT2 pre-built SNP index? jol.espinoz	04-30-2017 11:03 AM by jol.espinoz	0	9,763
Somatic Mutation Amount cindylanzao	04-23-2017 05:02 PM by cindylanzao	0	7,834
Coverage of reads not homogenous (sureselect target enrichement) Sam64	04-14-2017 08:37 AM by czhang	2	9,859
Removing duplicate PacBio reads AgatheJ	02-19-2017 08:38 AM by AgatheJ	8	11,139
CONTRA cnv on chrX Michel Meyer	02-06-2017 08:00 AM by Michel Meyer	0	7,760
hope to know the softwares to plot this image about genomic linkage map zhdorothy	12-12-2016 06:22 PM by zhdorothy	0	8,815
fastq.gz size for human WGS coverage calculation yipukangda	11-08-2016 05:26 PM by yipukangda	2	10,048

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