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Sticky: SEQwiki dan	06-13-2019 01:44 AM by abidalu	4	54,056
Sticky: ICGC-TCGA DREAM Somatic Mutation Calling Challenge khoulahan	01-16-2016 12:34 AM by locday123	8	106,112
Sticky: New Resources for 1000 Genomes ( 1 2) laura	04-15-2017 09:48 AM by lucasrocha	36	75,265
Sticky: Software packages for next gen sequence analysis ( 1 2 3 ... Last Page) sci_guy	12-25-2009 06:45 PM by ECO	236	576,759

Tophat - accepted_hits.sam file is empty? ( 1 2 3) madsen	08-01-2013 08:26 AM by westerman	42	11,887
cuffcompare class codes ( 1 2 3) leshkowitz	02-12-2015 08:14 AM by BioCathy	42	15,224
Adding Read Group info to a set of Bam files ( 1 2 3) wjeck	02-23-2015 06:16 AM by sarvidsson	42	102,119
Cufflinks / Cuffdiff problem ( 1 2 3) Morten	07-13-2013 11:51 PM by jp.	42	19,571
SOAP3-dp - the potential bwa killer? ( 1 2 3) ymc	06-03-2013 11:05 AM by Aqua	42	11,723
ChIA-PET tool ( 1 2 3) frymor	05-08-2017 07:56 PM by ccc081419	42	10,201
Non-overlapping read assembly ( 1 2 3) jstrohm	03-18-2016 03:53 AM by GenoMax	42	5,480
Browsers/Viewers for RNAseq ( 1 2 3) Xi Wang	08-09-2010 12:33 AM by Xi Wang	43	20,503
DESeq without replicates ( 1 2 3) austinpa	07-15-2014 07:38 PM by Jeremy	43	25,995
DWGSIM 0.1.4: whole genome NGS simulator ( 1 2 3) nilshomer	07-15-2012 07:46 AM by nilshomer	43	10,778
Haplotype Softwares ( 1 2 3) AsoBioInfo	08-12-2015 05:41 PM by dheeraj	43	7,468
STAR vs Tophat (2.0.5/6) ( 1 2 3) dvanic	05-21-2014 08:08 AM by earonesty	44	30,380
Breakway: Identify Structural Variations in Genomic Data ( 1 2 3) Michael.James.Clark	03-22-2012 01:48 AM by dnusol	45	20,517
libgtextutils installation problem for FASTX toolkit ( 1 2 3) jazz	10-13-2014 04:43 AM by GenoMax	45	12,864
read counts per transcript, edgeR, tophat ( 1 2 3) chrisbala	02-27-2015 05:51 AM by wanfahmi	46	28,061
New differential testing of cuffdiff/cufflinks since 1.3.0 ( 1 2 3) DerSeb	09-12-2013 06:46 AM by aguffanti	46	18,484
having searched all forum and still no solution about my cummeRbund problem. Pls help ( 1 2 3) spzhangmit	01-22-2015 05:13 PM by qgong	46	15,957
Differential expression, splicing, and promoter use with Cufflinks ( 1 2 3) Cole Trapnell	09-24-2015 04:03 PM by jordiabante	47	27,856
RNAseq analysis on a budget ( 1 2 3) pippi	09-13-2011 08:06 AM by rskr	47	11,965
New Short Read Aligner ( 1 2 3) sparks	08-26-2009 09:01 AM by sparks	48	19,211
bitwise flag in sam format and others ( 1 2 3) aurelielaugraud	11-25-2012 12:01 AM by edge	48	51,591
Understanding VCF format ( 1 2 3) ketan_bnf	07-09-2014 09:24 PM by drdna	48	60,796
How to use MAQVIEW? ( 1 2 3) cgjkjk	07-21-2010 08:51 PM by Ms@New	50	17,507
how to speed up blast+ ( 1 2 3) yaximik	09-27-2015 05:22 AM by GenoMax	50	15,473
Introducing BBNorm, a read normalization and error-correction tool ( 1 2 3) Brian Bushnell	01-27-2019 07:23 AM by mayabritstein	50	31,846
RNA-seq and normalization numbers ( 1 2 3) zee	12-12-2012 06:44 AM by jparsons	52	81,713
Multiple DGE libraries comparison. (EdgeR baySeq DESeq) ( 1 2 3) Roman Bruno	11-29-2011 07:39 AM by cjp	52	38,678
Introducing pBWA [Parallel BWA] ( 1 2 3) dp05yk	05-21-2013 11:27 PM by gmarco	52	17,550
Reliable gap closure of scaffolds with GapFiller ( 1 2 3) boetsie	03-27-2019 11:41 PM by jgroh	52	20,978
How to calculate coverage ( 1 2 3) arendon	08-20-2015 08:23 AM by criscruz	53	67,460

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