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Sticky: Free & Open Environment for RNA-seq analysis: Galaxy (http://usegalaxy.org) ( 1 2) jgoecks	11-07-2016 12:02 AM by suparmin	27	36,319

error in STAR yueli	Yesterday 02:33 PM by yueli	0	42
DEXseq in a docker environment Starr_Hazard	04-23-2018 01:39 PM by Starr_Hazard	0	118
RNA-seq of long RNAs (paired-end, stranded) -- fragmentation time emily202	04-17-2018 01:12 AM by ebbert	15	1,673
Ribo-zero - FastQC plots - Per sequence GC content Elsie	04-10-2018 01:58 PM by GenoMax	2	1,302
Advice for scRNA-seq Data sallehl	04-09-2018 03:54 PM by sallehl	0	208
FeatureCounts high counts with strand 0,1,2 option fazulur.r	04-06-2018 10:54 PM by fazulur.r	0	283
Inconsistent RNAseq data in knockdown expt Sealzad	04-05-2018 06:07 AM by kc3228	1	404
low GC% peak in one end of paired end reads AlexCalderwood	04-04-2018 03:37 AM by AlexCalderwood	7	1,139
How to classify chIP-seq reads into gene bins? a_sen	03-26-2018 07:51 AM by a_sen	0	317
RNA-seq in the NovaSeq scrosby	03-09-2018 08:19 AM by Markiyan	2	1,145
Experimental Design - Single Cell RNA-Sequencing rajeev.vikram	02-28-2018 10:36 PM by rajeev.vikram	0	549
Can Cufflinks report chimeric transcripts/fusions? DNAmethylome	02-28-2018 05:22 AM by l_zembek	2	751
Tophat2 alignment problem ajsn6c	02-26-2018 10:59 AM by ajsn6c	0	613
Webinar on RNA-Seq Data Analysis on 28 Feb Strandlife	02-20-2018 10:56 PM by Strandlife	1	791
Cuffcompare server issue Nancy_Julia	02-12-2018 12:10 PM by Nancy_Julia	0	645
5' RNA-Seq Bias? l_zembek	02-07-2018 11:16 AM by l_zembek	0	771
Hisat2 index with splice sites bvk	02-01-2018 07:51 AM by bvk	0	680
Single Cell FACS before Sequencing bruce01	01-31-2018 12:37 AM by bruce01	0	654
Biological replicates mengal	01-26-2018 07:53 PM by mengal	5	971
DESEQ2 Desing formula time series experiments with sham controls. adroval	01-26-2018 11:39 AM by adroval	0	683
Pan-Cancer Patterns of RNA-Binding Proteins in ~7000 tumor RNA-seq samples yjhua2110	01-25-2018 07:18 AM by yjhua2110	0	645
Fastqc salvadorherrandoperez	01-24-2018 03:49 AM by GenoMax	3	694
absolute microRNA levels queueing	01-19-2018 07:59 PM by queueing	0	671
HTSeq and repeated exons gmatt	01-17-2018 11:08 AM by gmatt	0	644
Beginner question for Differential Expression Analysis Vassen	01-16-2018 12:37 PM by Vassen	2	1,074
RNA_seq Data analysis Help - Trouble viewing files in IGV. Deamonkinge	01-11-2018 02:22 PM by sdriscoll	1	1,050
WGS and RNA-seq integrated in analysis of expression barthez95	01-11-2018 01:15 PM by sdriscoll	1	1,028
How can I specify DEseq2 to only perform comparisons on which I am interested with ? oliver.sacks	01-11-2018 12:51 PM by sdriscoll	1	1,128
transcript count after string tie merge rthapa	01-11-2018 12:44 PM by sdriscoll	1	853
Trimming left end (5') of reads?? ( 1 2) blindtiger454	01-11-2018 12:34 AM by liguanghao	23	61,014

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