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Sticky: A brief review of recent ChIP-Seq tools literature ( 1 2) ECO	04-26-2010 05:40 PM by sameet	20	65,084

Negative control sequencing ( 1 2) captainentropy	03-03-2016 02:16 PM by zgene	22	9,529
Questions regarding ChIP sonication and ChIP-Seq on heterochromatin aquleaf	03-03-2016 08:15 AM by aquleaf	0	2,144
Anyone has experience with .ylf (young lab format) files ? Thias	02-19-2016 08:32 AM by afiseha	2	3,940
RRBS on Ion Torrent? westisbest	02-13-2016 02:15 PM by creuter	1	2,078
Tools for PacBio Methylome?? cascoamarillo	01-27-2016 01:12 PM by cascoamarillo	0	1,281
Counting reads in miRNA experiment sara_	01-26-2016 04:48 PM by shi	3	1,885
Detection of differentially methylated regions (DMRs) ecSeq Bioinformatics	01-18-2016 12:06 PM by ecSeq Bioinformatics	0	1,675
Mnase cause high multimapper fraction? Mkrause	12-28-2015 06:24 AM by Mkrause	6	2,818
Motif enrichment in MEME - CentriMo cdias	12-24-2015 02:18 PM by epigenereg	1	2,547
Is it necessary to perform paired-end sequencing for ChIP-Seq aquleaf	12-24-2015 01:11 AM by Ohad	1	1,910
Homer mergePeaks : Cannot calculate the mean of overlapped peaks tuncmorova	12-09-2015 12:20 PM by tuncmorova	0	1,608
what an interesting base distribution plot! acdan	12-04-2015 06:41 AM by kmcarr	4	1,696
Index sequences and alignment Avidn	12-01-2015 11:27 AM by GenoMax	3	1,390
ChIP-chip to Coverage? RTM	11-05-2015 04:52 AM by RTM	0	1,269
Finding Overlapping Regions of Chip-Seq results, then visualising it. tuncmorova	10-31-2015 08:01 AM by tuncmorova	0	1,692
RoadMap DHS CD14 narrowPeak files alicia_ll_l	10-28-2015 11:34 AM by alicia_ll_l	0	1,840
Epigenetics Workshop - DNA Methylation Data Analysis (15-17 Dec 2015) ecSeq Bioinformatics	10-28-2015 02:45 AM by ecSeq Bioinformatics	2	3,247
RRBS Library 4 peaks Andersen	10-28-2015 02:44 AM by Andersen	2	1,406
Methylation in the + strand influence the expression of gene in the - strand? yao_licr	10-22-2015 12:31 PM by hamarillo	3	2,015
Nature Genetics - DNA Methyloma Analysis in Burkitt and follicular lymphomas ecSeq Bioinformatics	10-12-2015 02:55 AM by ecSeq Bioinformatics	0	1,475
which kit for RRBS? ( 1 2) lyndaben	10-01-2015 04:53 PM by nucacidhunter	26	10,986
Input giving peak at TSS! Yikes! pshah	09-08-2015 11:34 AM by pshah	2	1,690
partial methylation/intermediate methylation lancelothk	08-18-2015 02:45 PM by lancelothk	0	1,044
How to build reference genome for targeted region(from a BED file) for alignment? serenaliao	08-07-2015 02:44 PM by sxh	6	4,042
Problems amplifying Ox-BS & BS template from TrueMethyl cbg301	07-07-2015 11:35 AM by lyndaben	5	3,301
MeDIP-Seq (Illumina/Solexa) Nina_1	07-06-2015 02:27 AM by aleferna	5	7,635
How do I know whether my fastq file is ready for alignment? yul	05-11-2015 07:42 AM by TonyBrooks	3	2,378
SAAP-BS data analysis (RRBS) - BiSeq use and Coverage Histogram Maria_Maqueda	04-28-2015 08:41 AM by Maria_Maqueda	0	1,592
Can I use NGS to analyze DNA methylation in only 5 regions of interest? jdperez	04-22-2015 11:24 AM by jdperez	6	2,697
High non-CG methylation and low mapping efficiency in PBAT library yub	04-13-2015 01:02 AM by dpryan	1	1,577

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