Hi,
I wonder how people analyze the quality of the 454 Titanium reads? What softwares/tools/pipelines exist? I was thinking of converting the SFF files to FASTQ and then doing the regular fastx boxplots. But I wonder whether there are any tools that can directly assess the quality from the SFF files and whether my approach above is a good one to take.
Thanks for any suggestions!
I wonder how people analyze the quality of the 454 Titanium reads? What softwares/tools/pipelines exist? I was thinking of converting the SFF files to FASTQ and then doing the regular fastx boxplots. But I wonder whether there are any tools that can directly assess the quality from the SFF files and whether my approach above is a good one to take.
Thanks for any suggestions!
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