Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Blat installation error on Mac OS X

    Dear all,
    I am trying to install Blat(http://users.soe.ucsc.edu/~kent/src/) for Minimus2-blat(http://sourceforge.net/apps/mediawik...title=Minimus2) on Mac OS X. and getting the following error:

    $ make
    cd lib && make
    gcc -O -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_ -DJK_WARN -Wall -Werror -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -o errCatch.o -c errCatch.c
    cc1: warnings being treated as errors
    errCatch.c: In function ‘errCatchFinish’:
    errCatch.c:93: warning: format not a string literal and no format arguments
    make[1]: *** [errCatch.o] Error 1
    make: *** [all] Error 2

    Do anyone have any idea how to fix this? I would really appreciate your response.

    Regards,
    Rahul
    Rahul Sharma,
    Ph.D
    Frankfurt am Main, Germany

  • #2
    Not sure if you need to compile it for some reason, but there are MacOS executables available here. The intel one has worked fine for me.

    Comment


    • #3
      This post might help: https://shanguangyu.com/articles/ins...liner-command/

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Essential Discoveries and Tools in Epitranscriptomics
        by seqadmin


        The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist on Modified Bases...
        Yesterday, 07:01 AM
      • seqadmin
        Current Approaches to Protein Sequencing
        by seqadmin


        Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...
        04-04-2024, 04:25 PM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, 04-11-2024, 12:08 PM
      0 responses
      55 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 10:19 PM
      0 responses
      51 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 09:21 AM
      0 responses
      45 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-04-2024, 09:00 AM
      0 responses
      55 views
      0 likes
      Last Post seqadmin  
      Working...
      X