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  • Publicly available Illumina metagenomes

    Hi Friends,

    I want to test some of our computational tools on real world metagenomes. I am able to find many Sanger and 454 metagenomes but not an ideal Illumina one. By 'ideal', what I mean is a metagenome with number of reads in between one to ten million. Our computational resources are not sufficient enough to deal with datasets larger than the above limit. It will be much appreciated if you suggest me on such publicly available Illumina metagenome (please provide the link).

    Thank you guys...

  • #2
    Goto NCBI SRA
    Search "illumina metagenome"

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    • #3
      Thank you colindaven, that really helped ...

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