Hi ,
I am trying to do variant calling with mpileup using BioPerl.
I am using Bio::Tools::Run::Samtools but it says mpileup not registered.
Does this mean BioPerl doesn't support mpileup ?
Can anyone tell me how to run it(or any other variant calling program) through a BioPerl module ?
Thank you
-As
I am trying to do variant calling with mpileup using BioPerl.
I am using Bio::Tools::Run::Samtools but it says mpileup not registered.
Does this mean BioPerl doesn't support mpileup ?
Can anyone tell me how to run it(or any other variant calling program) through a BioPerl module ?
Thank you
-As
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