Hello . thank you in advance.
So I completed the data processing using ANNOVAR for an RNA-seq experiment, and I am brand new to variant detection analysis. I am interested if there are any good R packages that are used to analyze the variant call files. I have some minor experience just analyzing expression data, but am very new to .vcf analysis. Thank you again.
So I completed the data processing using ANNOVAR for an RNA-seq experiment, and I am brand new to variant detection analysis. I am interested if there are any good R packages that are used to analyze the variant call files. I have some minor experience just analyzing expression data, but am very new to .vcf analysis. Thank you again.