Hi everyone,
I'm currently dealing with the comparative analysis of the genome sequence of 35 bacterial strains.
I AM NOT BIOINFORMATICIAN, but a former collaborator in a former project dealing with 7 strains used CD-HIT for clustering the common orthologs, and I was wondering if the same tool could be used to cluster 35 genomes.
Is there any CD-HIT expert that could help me with this issue? If CD-HIT is not the tool…, any other suggestion?
I'm currently dealing with the comparative analysis of the genome sequence of 35 bacterial strains.
I AM NOT BIOINFORMATICIAN, but a former collaborator in a former project dealing with 7 strains used CD-HIT for clustering the common orthologs, and I was wondering if the same tool could be used to cluster 35 genomes.
Is there any CD-HIT expert that could help me with this issue? If CD-HIT is not the tool…, any other suggestion?
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