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  • How to write sbatch script

    Hello,
    Lucky to join SEQanswers! I have recently joined vlsci which requires me to submit the job as sbatch script. May I know how to learn to write a sbatch command loop eg., tophat so that I can process multiple samples?
    Regards,
    Scholar

  • #2
    sbatch scripts are just BASH scripts with some special comments. Just google for "sbatch example" for a bunch of examples.

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    • #3
      Thanks so much, dpryan

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