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dan 08-02-2011 05:17 AM

NGS 'how-tos' in the wiki
Following the suggestion by uads, I've set up some pages on the wiki where we can start adding 'how-tos' for various common 'NGS' pipelines, i.e.

* de novo assembly
* read mapping
* scaffolding (stand alone)
* SNP calling

The 'how-to' hub is here:

marcowanger 08-02-2011 05:40 AM

Thanks dan. Shall we keep it brief and point them to references or shall we write up something? How deep will we go?

marcowanger 08-02-2011 05:47 AM

In fact I find the wikipedia page quite informative. e.g.

Let's look at Short-Read Sequence Alignment alone. What we need to do is to add more technical details

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