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-   -   Velvet assembly stats (http://seqanswers.com/forums/showthread.php?t=32478)

NGS_New_User 08-02-2013 02:38 PM

Velvet assembly stats
 
Hi everyone,

My question is about the analysis of velvet denovo assembly.
Are the statistics printed out on the Log file the final real statistics of the assembly?
How does one go about to analyze the assembly from velvet to see if if it is of good quality.
I will appreciate whatever ideas you give, even if its re-directing me to a paper that talks about that.

mastal 08-02-2013 02:58 PM

Quote:

Originally Posted by NGS_New_User (Post 112445)
Hi everyone,

Are the statistics printed out on the Log file the final real statistics of the assembly?

Yes, they are.

Have a look at this paper:

http://genome.cshlp.org/content/22/3/557.abstract


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