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-   -   GC Cover versus mapped depth (http://seqanswers.com/forums/showthread.php?t=9337)

BertieWooster 02-08-2011 05:25 PM

GC Cover versus mapped depth
 
Hello,

A rather naive question:

I would like to compute the GC% versus mapped depth for contiguous sliding windows of 2000 bp. For the mapped depth do I just add the coverage at all GC positions for the same window I get the GC%?

Thanks,
BertieW


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