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deprekate 10-25-2012 04:24 PM

truncation of contig in velvet
 
Hi I have playing with velvet and I found this strange artifact when assembling data. When I have the following 2 sequences they get assembled into 2 contigs, both of which seem to have been clipped at the end.
https://dl.dropbox.com/u/812387/Scre...17.56%20PM.png

Why was the "TAGTAATATAAAGATA..." not included in the contigs since the sequences matched exactly


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