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-   -   Problem in mpileup file where size of sequence does not match size of quality (http://seqanswers.com/forums/showthread.php?t=90364)

cryptodice 08-04-2019 07:16 PM

Problem in mpileup file where size of sequence does not match size of quality
 
Hi everyone,
I am using an mpileup file given to us by a service provider from our data, when I am processing with downstream analyses, it is showing me an error like:
size of sequence does not equal size of quality: AaAaAaAAAAAAAAaAAaaAAaaaAAaAaaAaAAaaaaaaaaAAaaaAAAAAaAAaaaAAAAAAAAAAaaAaaaaAaaaAaAAaaAaAAaaaaaaAAAAAaaaaaA, IJ<JJJJFJAJFJJFJJJJJJJJJJJJJJJJJJFJJJJJJJJJJJJJF7JJJJAJJJ<JJJJFJJJJJJJJJJJJJJJFJJJJJJJJJFJJJJ

Can I get some help on how to fix this?


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