SEQanswers

SEQanswers (http://seqanswers.com/forums/index.php)
-   Epigenetics (http://seqanswers.com/forums/forumdisplay.php?f=24)
-   -   CexoR: peak-pair calling in ChIP-exo data with replicates (http://seqanswers.com/forums/showthread.php?t=34680)

pmad 10-21-2013 04:04 PM

CexoR: peak-pair calling in ChIP-exo data with replicates
 
Dear bioinformatics community,

If you are producing of analyzing ChIP-exo data (Rhee HS, Pugh BF, 2011, Cell 147:1408-19) with replicates, you might want to consider CexoR to uncover high-resolution protein-DNA interactions. It processes data data in BAM aligment format. Devel version is
at: http://bioconductor.org/packages/dev...tml/CexoR.html


Best regards,
Pedro Madrigal

Research Associate
Wellcome Trust Sanger Institute
Wellcome Trust Genome Campus
Hinxton,
Cambridge, CB10 1SA
UK


All times are GMT -8. The time now is 04:46 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.