I have assembled several contigs with MaSuRCA 2.3.2. I have two questions:
1) I have one contig that I'm *very* curious how it was built. Is there a way I can tell what reads were joined to make this particular contig? (I suspect one of the libraries was contaminated.)
2) How can I tell how many reads were NOT used in the assembly?
Thanks!
1) I have one contig that I'm *very* curious how it was built. Is there a way I can tell what reads were joined to make this particular contig? (I suspect one of the libraries was contaminated.)
2) How can I tell how many reads were NOT used in the assembly?
Thanks!