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-   -   gff file includes the fasta sequence at the end (http://seqanswers.com/forums/showthread.php?t=90737)

gretagecse 09-02-2019 01:04 AM

gff file includes the fasta sequence at the end
 
Hi all,

i received a gff file of a whole genome I am working with, and unexpectedly I found the nucleotide sequence at the end of the file. Is it a common thing

Cheers,
G

Gopo 09-02-2019 01:42 AM

No this is not common, but MAKER's (http://www.yandell-lab.org/software/maker.html) gff3_merge script can output a GFF file with FASTA sequence at the end.

gretagecse 09-02-2019 06:28 AM

Thanks a lot!


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