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-   -   TCGA gene annotation conversion for RNA-seq datasets (http://seqanswers.com/forums/showthread.php?t=74148)

kuin81 02-10-2017 01:35 AM

TCGA gene annotation conversion for RNA-seq datasets
 
Dear all,

I downloaded some RNA-seq datasets from TCGA but I am not able to convert the gene ids to the current ensembl annotation release. Many gene names are ambiguous and some entrez ids have no ensembl id correspondance.
Anybody can help with the conversion?
thanks,


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