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-   -   Nexgen simulator. (http://seqanswers.com/forums/showthread.php?t=9437)

aloliveira 02-14-2011 08:48 AM

Nexgen simulator.
 
Hello,

Is there any software that simulates the large-scale sequencing generated by Solexa and SOLiD platforms? I have some genomes and wanted to test some assemblers to observe their performance and need a program that shred the genome into small fragments with a certain coverage.

Best regards,
André.

jts 02-14-2011 08:57 AM

I have found the SimSeq simulator to be quite useful:

https://github.com/jstjohn/SimSeq


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