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-   -   Tophat2 --fusion-search: use -G/--GTF or not? (http://seqanswers.com/forums/showthread.php?t=25616)

turnersd 12-10-2012 01:28 PM

Tophat2 --fusion-search: use -G/--GTF or not?
 
I'm using tophat2 --fusion-search and wondering what the effect might be of supplying a gene annotation with the -G/--GTF option versus not using that option. Thoughts anyone?


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