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-   -   Human exon, intron and promotor bedfile (http://seqanswers.com/forums/showthread.php?t=8557)

khb 12-22-2010 03:28 AM

Human exon, intron and promotor bedfile
 
Hi
I have done a chip-seq analysis and got a file with name peaks.bed I want to investigate if the peaks are in the promotor, exon og intron of hg19. Does somebody know where to get the bedfiles of promotor, exon and intron of humans?
I've tried UCSC genomebrowser and Table, but when I use intersectbed, this files consist of many different transcripts or something like that. Does somebody know how to get this?

Thanks a lot:)

csoong 12-22-2010 06:47 AM

ucsc table shouldwork
choose the BED format for the table you need to download


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