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-   -   how to represent my ngs results (http://seqanswers.com/forums/showthread.php?t=83766)

jop 08-02-2018 12:28 AM

how to represent my ngs results
 
Hello!

I am a new member of your fantastic society and I am also making my first attempt on next generation sequencing.

I am working on a project with rats and the different populations that their microbiome consists of...

So, I have my results in an excel sheet and I have to make a heatmap.

My question is a basic one: how do I generate a heatmap? Do I need to make formulations on the results? Do I need something else apart from excel?

Thank you in advance- Keep sciencing!

luc 08-02-2018 04:30 PM

What type of results do you have at the moment?

I am sure there will be a way to generate heatmaps in Excel.

It will certainly better in the long run to become familiar with R/RStudio and the appropriate scripts and statistics. I can't tell you which, I do not analyze this type of data myself.

jop 08-02-2018 11:52 PM

My results are in an excel sheet and the have for each sample a percentage for a specific type of bacteria.


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