how to set seed length? When i try to run Tophat, it always showed "seed length: 90bp", but my reads are only 90bp, i would like to set the seed length to 35bp, but i fail to find any parameter in Manual.
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Originally posted by nicklin View PostUnder Advanced options:
--segment-length Each read is cut up into segments, each at least this long. These segments are mapped independently. The default is 25.
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