SEQanswers (
-   Metagenomics (
-   -   how to represent my ngs results (

jop 08-02-2018 12:28 AM

how to represent my ngs results

I am a new member of your fantastic society and I am also making my first attempt on next generation sequencing.

I am working on a project with rats and the different populations that their microbiome consists of...

So, I have my results in an excel sheet and I have to make a heatmap.

My question is a basic one: how do I generate a heatmap? Do I need to make formulations on the results? Do I need something else apart from excel?

Thank you in advance- Keep sciencing!

luc 08-02-2018 04:30 PM

What type of results do you have at the moment?

I am sure there will be a way to generate heatmaps in Excel.

It will certainly better in the long run to become familiar with R/RStudio and the appropriate scripts and statistics. I can't tell you which, I do not analyze this type of data myself.

jop 08-02-2018 11:52 PM

My results are in an excel sheet and the have for each sample a percentage for a specific type of bacteria.

All times are GMT -8. The time now is 03:17 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.