Hi,
I tried to do the analysis of the "example.File" with DESeq 1.10.1.
The following message appeared:
Erreur : 'estimateVarianceFunctions' is defunct.
Use 'estimateDispersions' instead.
See help("Defunct")
So I tried to use "estimateDispersions". It seemed to be successful, but after running the "nbinomTest" function all padj value were equal to 1 and resVar weren't calculated.
Does someone has experimented the same?
JP
I tried to do the analysis of the "example.File" with DESeq 1.10.1.
The following message appeared:
Erreur : 'estimateVarianceFunctions' is defunct.
Use 'estimateDispersions' instead.
See help("Defunct")
So I tried to use "estimateDispersions". It seemed to be successful, but after running the "nbinomTest" function all padj value were equal to 1 and resVar weren't calculated.
Does someone has experimented the same?
JP
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