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-   -   Visualization of whole genome DNA methylation in IGB (March 25, 11:30am-12pm EST) (http://seqanswers.com/forums/showthread.php?t=51127)

Nowlan Freese 03-17-2015 02:52 PM

Visualization of whole genome DNA methylation in IGB (March 25, 11:30am-12pm EST)
 
“Focus on a Feature: Visualization of whole genome DNA methylation data in IGB.”

This tutorial has ended. You can find the recording here.

To follow along, you can find the data I used in Galaxy here.

You can find previous Focus on a Feature tutorials here.

Program:
1. Intro to generating whole genome bisulfite sequencing (BS-seq).
2. Differential visual analysis of BS-seq data in IGB.
3. Comparative visualization with RNA-Seq data.

Integrated Genome Browser (IGB)
IGB provides an advanced, highly customizable environment for exploring and analyzing large-scale genomic data sets. Using IGB you can visually analyze RNA-Seq, ChIP-Seq, and many other genomic projects. The best part is that IGB can be used to produce publication quality images from genome scale data sets, and is provided FREE.

If you have questions or need assistance, contact us at:

Nowlan Freese nfreese@uncc.edu
Ann Loraine aloraine@uncc.edu

To download and start IGB, go to bioviz.org and select the "Download Now" link.

**Please share this with students and colleagues**


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