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-   -   get rsID or positions from variant name/gene info (http://seqanswers.com/forums/showthread.php?t=96712)

floydian_slip 11-10-2020 06:04 AM

get rsID or positions from variant name/gene info
 
Hi,
I have a list of variant and gene info as follows:

MCOLN1 c.406-2A>G
G6PC c.247C>T
PCDH15 c.733C>T
CLRN1 c.144T>G
NEB c.7431+1917_7536+372del

I would like to either get rsIDs or preferably their coordinates in hg19/GRCh37.
Is there a straight forward way of doing this? I have 100s of such entries hence manually not possible.
Thanks so much in advance.


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