SEQanswers (
-   Bioinformatics (
-   -   Velvet referenced assembly (

ronaldrcutler 08-01-2016 02:41 PM

Velvet referenced assembly
Hello all,

I see that Velvet has a Columbus module to assemble genomes using a reference as a template. Although it also says this is best used for transcriptome assembly and identification of breakpoints.

Has anybody used this for a genome assembly? Where one uses contigs from a de novo assembly as input against a closely related reference genome?


All times are GMT -8. The time now is 03:02 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.