SEQanswers

SEQanswers (http://seqanswers.com/forums/index.php)
-   Bioinformatics (http://seqanswers.com/forums/forumdisplay.php?f=18)
-   -   merging 2 sam files (http://seqanswers.com/forums/showthread.php?t=13067)

papori 07-29-2011 05:44 AM

merging 2 sam files
 
Hi all,
i was using BWA 0.5.9
i was doing samse.
i did samse for pair ends separately.
first for first pair , next to the second pair.
So , i am having now 2 files
*_1.sam
*_2.sam

Can i merge it with samtools?
If i will merge it with samtools , will the result be the same as i was doing sampe?
I am not using sampe , because i have segmentation fault with sampe, but not with sampe.

Thanks , Papori :)


All times are GMT -8. The time now is 06:54 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.