SEQanswers (
-   Genomic Resequencing (
-   -   IMAGE input files (

skingan 07-29-2010 01:02 PM

IMAGE input files

We are using IMAGE to fill in gaps of our genome assembly but are not sure how to generate the required input files:

contigs.fa.original and

Our initial assembly is done with BWA. Does anyone have a script that can use a BAM file (the BWA output) to generate contigs.fa.original and read.placed.original?


Sarah Kingan

All times are GMT -8. The time now is 11:03 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.