SEQanswers (
-   Bioinformatics (
-   -   Bowtie mapping with more mismatches (

mapper 01-05-2011 02:11 AM

Bowtie mapping with more mismatches
We have 50bp reads and want to map with bowtie with 6mm. However it seems that only 3 mm are allowed at max. I have tried to look on net and many people suggested to use -e option..I am not sure what would be the best parameters to map SOLiD 50bp reads with 6mm ? Can anyone help on this?

All times are GMT -8. The time now is 12:39 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.