![]() |
samtools view: failed to add PG line to the header
So I get a error when trying to convert my sam to a bam:
samtools view: failed to add PG line to the header My header seems OK (see below), but I am new at this. How do I fix my headers so my command generates a bam file samtools view -bS joelle.sam > joelle.bam @SQ SN:utg000001l LN:5073047 @SQ SN:utg000002l LN:24568116 @SQ SN:utg000003l LN:22903238 @SQ SN:utg000004l LN:14007477 @SQ SN:utg000005l LN:8330460 @SQ SN:utg000006l LN:20648589 |
All times are GMT -8. The time now is 03:37 PM. |
Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.