SEQanswers

SEQanswers (http://seqanswers.com/forums/index.php)
-   Epigenetics (http://seqanswers.com/forums/forumdisplay.php?f=24)
-   -   RoadMap DHS CD14 narrowPeak files (http://seqanswers.com/forums/showthread.php?t=63813)

alicia_ll_l 10-28-2015 10:34 AM

RoadMap DHS CD14 narrowPeak files
 
I am interested in the DHS files generated by UW in CD14 primary cells and accessible through the Epigenomics RoadMap website.

Four repeats have been done and bed files are available at:
http://genboree.org/EdaccData/Releas...Primary_Cells/

At the same time a narrowPeak file is available at:
http://egg2.wustl.edu/roadmap/data/b...ntModel/final/

I have two questions:

1.Are the 4 bed files alignment files? They look like that to me but I am not sure.

2.Is the narrowPeak file a combination of the 4 repeats peaks calling files?If so, following which criteria?

Thank you very much in advance!

Alicia


All times are GMT -8. The time now is 04:49 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.