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-   -   Retrieve read IDs from SPAdes contigs (http://seqanswers.com/forums/showthread.php?t=89740)

lasantos 06-12-2019 11:14 PM

Retrieve read IDs from SPAdes contigs
 
Hi everyone,
I'm using SPAdes 3.12 to assemble contigs using reads. The question is, is there any way to retrieve the reads used to assemble the contigs without a further alignment step? I believe that if SPAdes build the contigs using the reads it must containg this information somewhere I could not find. Thank you in advance!


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