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-   -   Is there a program to error check / clean up FASTQ files? (http://seqanswers.com/forums/showthread.php?t=15274)

marcovth 11-04-2011 08:03 AM

Is there a program to error check / clean up FASTQ files?
 
Is there a program to error check / clean up FASTQ files?

All the programs I have tried for a denovo assembly have failed.

westerman 11-04-2011 08:29 AM

Try FastQC -- it should give you a feeling about various parameters (quality, length, etc.) of your fastq file.


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