SEQanswers - Is there a program to error check / clean up FASTQ files?

SEQanswers (http://seqanswers.com/forums/index.php)

- Bioinformatics (http://seqanswers.com/forums/forumdisplay.php?f=18)

- - Is there a program to error check / clean up FASTQ files? (http://seqanswers.com/forums/showthread.php?t=15274)

marcovth

11-04-2011 08:03 AM

Is there a program to error check / clean up FASTQ files?

Is there a program to error check / clean up FASTQ files?

All the programs I have tried for a denovo assembly have failed.

westerman

11-04-2011 08:29 AM

Try FastQC -- it should give you a feeling about various parameters (quality, length, etc.) of your fastq file.

All times are GMT -8. The time now is 05:58 AM.