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brofallon 11-09-2012 07:50 AM

NA12878 truth sets?
Howdy all, I'm searching for high-quality sets of variant calls for NA12878 to be used as a gold standard. Anyone have ideas of where to look for a super high quality NA12878 variant call set? Anyone willing to share their own?

jparsons 11-09-2012 10:02 AM

This presentation gave the impression that the PGP 12878 was pretty impressive.

And the illumina site at least says the variant calls have been uploaded to public databases.

Not really my area but it might help you anyway.

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