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-   -   Silva database (http://seqanswers.com/forums/showthread.php?t=31002)

naman 06-11-2013 05:36 AM

Silva database
 
Dear SEQanswer,

I have list of accession numbers of sequences from one of the paper and I want to download those particular list from SILVA database. I tried but what I could do is search individually and download but not all together. If any one has done this please let me know also.
One thing I know is possible to download full database and grep my list but then I have no idea how to download reference file in silva. I found it bit complicated.

Thanks in advance
Cheers,

jmeppley 06-13-2013 07:03 AM

You can get the FASTA files from here:
http://www.arb-silva.de/no_cache/dow...e_111/Exports/

cheers.
-j


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