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Forum: Bioinformatics 08-24-2016, 09:04 AM
Replies: 0
Views: 1,420
Posted By Pushpinder
samtools mpileup

I am new to the file of SNP analysis. Can someone explain me what is the difference between the two callers options (-c and -m) in samtools mpileup?
Forum: Bioinformatics 05-23-2016, 10:11 AM
Replies: 0
Views: 1,175
Posted By Pushpinder
Question DESeq

Hey All,

I am working on SNPs analysis, and wanted to group my data based on presence (1) or absence (0) of SNP.s As DESeq does Binomial stats, was wondering if I can use DESeq to get significant...
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