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Forum: Bioinformatics 04-19-2016, 11:18 PM
Replies: 9
Views: 2,626
Posted By XCL
Right, we will try them all. The enough RAM is...

Right, we will try them all. The enough RAM is always important until the transfer rate of sad can reach at least 5GB/s. Thank you again.
Forum: Bioinformatics 04-19-2016, 11:18 AM
Replies: 9
Views: 2,626
Posted By XCL
Dear GenoMax, thank you very much, that link is...

Dear GenoMax, thank you very much, that link is quite useful. There is another problem/situation that the genome is with very high heterozygosity, whether the five hybrid assemblers (pacBioToCA,...
Forum: Bioinformatics 04-19-2016, 08:32 AM
Replies: 9
Views: 2,626
Posted By XCL
Hi GenoMax, thanks a lot. Exactly, if there is...

Hi GenoMax, thanks a lot. Exactly, if there is any tool which can use the short reads to correct the error on the long reads, that would be great. Such tools should be very useful for combined...
Forum: Bioinformatics 04-19-2016, 08:06 AM
Replies: 9
Views: 2,626
Posted By XCL
Combined assembly analysis (short reads + long reads)

Dear NGS Experts,

I have a question about combined genome assembly.

We have 75X Hiseq sequencing of an animal species genome (about 3Gb genome size) together with 50X Pacbio Sequel system, now,...
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