SEQanswers

Go Back   SEQanswers > Search Forums


Showing results 1 to 12 of 12
Search took 0.00 seconds.
Search: Posts Made By: sciencewu
Forum: Bioinformatics 12-04-2012, 06:23 PM
Replies: 5
Views: 5,085
Posted By sciencewu
I also encounter this problem, and now I am using...

I also encounter this problem, and now I am using the picard/FixMateInformation.jar to fix it, maybe you can try
Forum: Bioinformatics 11-21-2012, 09:18 PM
Replies: 1
Views: 2,737
Posted By sciencewu
I also encounter this problem, anybody has some...

I also encounter this problem, anybody has some suggestion?
Forum: Bioinformatics 11-18-2012, 11:48 PM
Replies: 8
Views: 1,516
Posted By sciencewu
I think splicing not including in the region of...

I think splicing not including in the region of exome. also this can affect the function of protein. ncRNA is also the regulation element of genomic region.
this is my opinion, how do you think?
Forum: Bioinformatics 11-18-2012, 08:50 PM
Replies: 8
Views: 1,516
Posted By sciencewu
exonic , UTR5 and UTR3

exonic , UTR5 and UTR3
Forum: Epigenetics 11-15-2012, 10:32 PM
Replies: 27
Views: 11,209
Posted By sciencewu
MEDIPS is a friendly package for analysis the...

MEDIPS is a friendly package for analysis the MeDIP data, maybe you can try it.
Forum: Epigenetics 08-30-2011, 03:18 AM
Replies: 0
Views: 1,878
Posted By sciencewu
More information on RIP-seq

Hi everyone,
I am a freshman,Could you give me more information on RIP-seq, I want to do some research about the regulation of genomic on the RNA level.

Sincerely !
Forum: De novo discovery 08-30-2011, 12:41 AM
Replies: 3
Views: 2,322
Posted By sciencewu
Did you get a good result ? what's FP and FN ?

Did you get a good result ? what's FP and FN ?
Forum: De novo discovery 08-29-2011, 11:54 PM
Replies: 3
Views: 2,322
Posted By sciencewu
many papers using the Sanger sequences ,but...

many papers using the Sanger sequences ,but didn't give a criteria . maybe 10x is enough.
Forum: Epigenetics 08-29-2011, 11:24 PM
Replies: 8
Views: 7,891
Posted By sciencewu
SE is better for you .

SE is better for you .
Forum: Epigenetics 08-29-2011, 11:00 PM
Replies: 35
Views: 13,504
Posted By sciencewu
bsmap maybe is good for you , but the cost of...

bsmap maybe is good for you , but the cost of time is huge.
if you knew the mechnism of bisulfite alignment that many aligners is also ok .
Forum: Epigenetics 08-29-2011, 10:21 PM
Replies: 3
Views: 4,870
Posted By sciencewu
1. you are right,but I am not sure all the...

1. you are right,but I am not sure all the mapping locations with the same mapping quality.
2. The column 3 give you the mapping hits which can't not give you the methylation information
3.The...
Forum: Introductions 08-29-2011, 07:04 PM
Replies: 0
Views: 1,290
Posted By sciencewu
My First Post

Hi everyone,
I am focusing on epigenomics, this forums is so good! I am comming now.
Showing results 1 to 12 of 12

 


All times are GMT -8. The time now is 12:50 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO